HCSGD entry for RIOK3
1. General information
| Official gene symbol | RIOK3 |
|---|---|
| Entrez ID | 8780 |
| Gene full name | RIO kinase 3 |
| Other gene symbols | SUDD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0004674 | Protein serine/threonine kinase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0007059 | Chromosome segregation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0222508643 | 0.9880910756 | 0.3570275442 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1633635782 |
| GSE13712_SHEAR | Up | 0.5467655998 |
| GSE13712_STATIC | Up | 0.2853979572 |
| GSE19018 | Up | 0.4032380867 |
| GSE19899_A1 | Up | 0.2192036695 |
| GSE19899_A2 | Up | 0.4898168496 |
| PubMed_21979375_A1 | Up | 0.7297510403 |
| PubMed_21979375_A2 | Up | 0.5569866340 |
| GSE35957 | Up | 0.2178340093 |
| GSE36640 | Up | 0.6590998264 |
| GSE54402 | Up | 0.1494416761 |
| GSE9593 | Up | 0.3184034535 |
| GSE43922 | Up | 0.5268177065 |
| GSE24585 | Up | 0.0337369571 |
| GSE37065 | Up | 0.0482089154 |
| GSE28863_A1 | Down | -0.1562437330 |
| GSE28863_A2 | Up | 0.2561468428 |
| GSE28863_A3 | Down | -0.0302572189 |
| GSE28863_A4 | Down | -0.0061837225 |
| GSE48662 | Up | 0.0233862588 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047563 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051135 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051978 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052360 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
