HCSGD entry for RNGTT
1. General information
| Official gene symbol | RNGTT |
|---|---|
| Entrez ID | 8732 |
| Gene full name | RNA guanylyltransferase and 5'-phosphatase |
| Other gene symbols | CAP1A HCE HCE1 hCAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004484 | MRNA guanylyltransferase activity | IEA | molecular_function |
| GO:0004651 | Polynucleotide 5'-phosphatase activity | IEA | molecular_function |
| GO:0004725 | Protein tyrosine phosphatase activity | IEA | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA TAS | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006370 | 7-methylguanosine mRNA capping | IEA TAS | biological_process |
| GO:0006396 | RNA processing | TAS | biological_process |
| GO:0008138 | Protein tyrosine/serine/threonine phosphatase activity | IEA | molecular_function |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6188581627 | 0.7142544812 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0640790435 |
| GSE13712_SHEAR | Up | 0.0765721016 |
| GSE13712_STATIC | Up | 0.1461893895 |
| GSE19018 | Down | -0.1022417818 |
| GSE19899_A1 | Up | 0.0285286626 |
| GSE19899_A2 | Down | -0.0367799159 |
| PubMed_21979375_A1 | Up | 0.3985617694 |
| PubMed_21979375_A2 | Up | 0.1112226143 |
| GSE35957 | Down | -0.0013341344 |
| GSE36640 | Down | -0.3172539000 |
| GSE54402 | Up | 0.2138032967 |
| GSE9593 | Down | -0.0969330517 |
| GSE43922 | Up | 0.0067867182 |
| GSE24585 | Up | 0.2683940223 |
| GSE37065 | Up | 0.0415848407 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.2571127353 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Isopropyl Alcohol | DB02325 | EXPT01912 | DB04402 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-25-3p | MIMAT0000081 | MIRT050338 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050539 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
