HCSGD entry for B4GALT3
1. General information
| Official gene symbol | B4GALT3 |
|---|---|
| Entrez ID | 8703 |
| Gene full name | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 |
| Other gene symbols | beta4Gal-T3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0003831 | Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity | IEA | molecular_function |
| GO:0003945 | N-acetyllactosamine synthase activity | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0008378 | Galactosyltransferase activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3379248547 | 0.5741442156 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2297354032 |
| GSE13712_SHEAR | Down | -0.2721678827 |
| GSE13712_STATIC | Down | -0.0391647008 |
| GSE19018 | Up | 0.0077930847 |
| GSE19899_A1 | Down | -0.0592313038 |
| GSE19899_A2 | Up | 0.4168033848 |
| PubMed_21979375_A1 | Up | 0.7049182451 |
| PubMed_21979375_A2 | Up | 0.3245447900 |
| GSE35957 | Down | -0.2945136982 |
| GSE36640 | Down | -0.1360695186 |
| GSE54402 | Up | 0.1676986260 |
| GSE9593 | Up | 0.0194085261 |
| GSE43922 | Up | 0.5057273706 |
| GSE24585 | Down | -0.0415749226 |
| GSE37065 | Up | 0.0498138882 |
| GSE28863_A1 | Down | -0.1958924407 |
| GSE28863_A2 | Up | 0.1726082897 |
| GSE28863_A3 | Down | -0.2665277260 |
| GSE28863_A4 | Down | -0.3212598420 |
| GSE48662 | Up | 0.0862327999 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| N-Acetyl-D-glucosamine | DB00141 | NUTR00040 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025373 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027543 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027885 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045984 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
