HCSGD entry for SSNA1
1. General information
| Official gene symbol | SSNA1 |
|---|---|
| Entrez ID | 8636 |
| Gene full name | Sjogren syndrome nuclear autoantigen 1 |
| Other gene symbols | N14 NA-14 NA14 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000086 | G2/M transition of mitotic cell cycle | TAS | biological_process |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0042073 | Intraciliary transport | IEA | biological_process |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0060830 | Ciliary receptor clustering involved in smoothened signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5821692869 | 0.1276345238 | 0.9999902473 | 0.6881661069 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0561060658 |
| GSE13712_SHEAR | Down | -0.1654810206 |
| GSE13712_STATIC | Down | -0.0786565394 |
| GSE19018 | Up | 0.0246885247 |
| GSE19899_A1 | Down | -0.0210530077 |
| GSE19899_A2 | Up | 0.6303453431 |
| PubMed_21979375_A1 | Up | 1.0592090487 |
| PubMed_21979375_A2 | Up | 0.2831731252 |
| GSE35957 | Down | -0.6990472399 |
| GSE36640 | Up | 0.0353900043 |
| GSE54402 | Up | 0.2546955976 |
| GSE9593 | Down | -0.5489078144 |
| GSE43922 | Down | -0.0142150423 |
| GSE24585 | Down | -0.7024629997 |
| GSE37065 | Down | -0.1352797014 |
| GSE28863_A1 | Down | -0.2419209849 |
| GSE28863_A2 | Down | -0.3683327265 |
| GSE28863_A3 | Up | 0.0273399538 |
| GSE28863_A4 | Up | 0.1533324406 |
| GSE48662 | Down | -0.1837180048 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001330 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022545 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041367 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
