HCSGD entry for RDH16
1. General information
| Official gene symbol | RDH16 |
|---|---|
| Entrez ID | 8608 |
| Gene full name | retinol dehydrogenase 16 (all-trans) |
| Other gene symbols | RODH-4 SDR9C8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004745 | Retinol dehydrogenase activity | TAS | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006629 | Lipid metabolic process | TAS | biological_process |
| GO:0009055 | Electron carrier activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3582445918 | 0.9232131074 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1730567637 |
| GSE13712_SHEAR | Down | -0.2382824635 |
| GSE13712_STATIC | Up | 0.1004068250 |
| GSE19018 | Up | 0.1247402926 |
| GSE19899_A1 | Up | 0.1267560082 |
| GSE19899_A2 | Up | 0.0401522549 |
| PubMed_21979375_A1 | Down | -0.0359631938 |
| PubMed_21979375_A2 | Up | 0.0196527296 |
| GSE35957 | Up | 0.0838544083 |
| GSE36640 | Up | 0.2879760391 |
| GSE54402 | Up | 0.0796434900 |
| GSE9593 | Up | 0.0977219256 |
| GSE43922 | Up | 0.0462420170 |
| GSE24585 | Up | 0.1107461796 |
| GSE37065 | Down | -0.0210260790 |
| GSE28863_A1 | Up | 0.1046030642 |
| GSE28863_A2 | Up | 0.0421105261 |
| GSE28863_A3 | Up | 0.2575771805 |
| GSE28863_A4 | Up | 0.0980524027 |
| GSE48662 | Up | 0.1934147079 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025909 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
