HCSGD entry for PRPF18

1. General information

Official gene symbolPRPF18
Entrez ID8559
Gene full namePRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)
Other gene symbolsPRP18 hPrp18
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusTAScellular_component
GO:0005681Spliceosomal complexIEAcellular_component
GO:0006397MRNA processingIEAbiological_process
GO:0008380RNA splicingIEAbiological_process
GO:0016607Nuclear speckIEAcellular_component
GO:0019870Potassium channel inhibitor activityIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.88177639910.35817984120.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0424882545
GSE13712_SHEARDown-0.0391131290
GSE13712_STATICUp0.0307647506
GSE19018Up0.0643165989
GSE19899_A1Up0.3070502184
GSE19899_A2Down-0.2619177914
PubMed_21979375_A1Up0.1289136561
PubMed_21979375_A2Down-0.5799616866
GSE35957Up0.1730968490
GSE36640Down-0.4086943475
GSE54402Up0.1289213863
GSE9593Down-0.0905798497
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.4612427976

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.