HCSGD entry for GFM1
1. General information
| Official gene symbol | GFM1 |
|---|---|
| Entrez ID | 85476 |
| Gene full name | G elongation factor, mitochondrial 1 |
| Other gene symbols | COXPD1 EFG EFG1 EFGM EGF1 GFM hEFG1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003746 | Translation elongation factor activity | IDA IEA | molecular_function |
| GO:0003924 | GTPase activity | IDA IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0006184 | GTP catabolic process | IDA | biological_process |
| GO:0070125 | Mitochondrial translational elongation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7680731241 | 0.1787455986 | 0.9999902473 | 0.8185043319 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2191807323 |
| GSE13712_SHEAR | Down | -0.1790449155 |
| GSE13712_STATIC | Down | -0.1553296683 |
| GSE19018 | Down | -0.4800988304 |
| GSE19899_A1 | Down | -0.0663990566 |
| GSE19899_A2 | Up | 0.0573588393 |
| PubMed_21979375_A1 | Up | 0.2844670066 |
| PubMed_21979375_A2 | Down | -0.0865422097 |
| GSE35957 | Up | 0.2306348462 |
| GSE36640 | Up | 0.1676827269 |
| GSE54402 | Up | 0.1528292557 |
| GSE9593 | Down | -0.0500278004 |
| GSE43922 | Up | 0.0436946229 |
| GSE24585 | Down | -0.1193767931 |
| GSE37065 | Up | 0.0206469217 |
| GSE28863_A1 | Down | -0.1054122878 |
| GSE28863_A2 | Up | 0.2418495610 |
| GSE28863_A3 | Down | -0.8614236700 |
| GSE28863_A4 | Down | -0.2118053586 |
| GSE48662 | Down | -0.4547838529 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001465 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
