HCSGD entry for TNKS1BP1
1. General information
| Official gene symbol | TNKS1BP1 |
|---|---|
| Entrez ID | 85456 |
| Gene full name | tankyrase 1 binding protein 1, 182kDa |
| Other gene symbols | TAB182 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000288 | Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | TAS | biological_process |
| GO:0000289 | Nuclear-transcribed mRNA poly(A) tail shortening | TAS | biological_process |
| GO:0005634 | Nucleus | NAS | cellular_component |
| GO:0005724 | Nuclear telomeric heterochromatin | NAS | cellular_component |
| GO:0005737 | Cytoplasm | NAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007004 | Telomere maintenance via telomerase | NAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016071 | MRNA metabolic process | TAS | biological_process |
| GO:0019899 | Enzyme binding | NAS | molecular_function |
| GO:0030014 | CCR4-NOT complex | IDA | cellular_component |
| GO:0030506 | Ankyrin binding | NAS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0114846358 | 0.9074990502 | 0.2711095067 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1226430774 |
| GSE13712_SHEAR | Down | -0.0300380499 |
| GSE13712_STATIC | Down | -0.1088295249 |
| GSE19018 | Up | 0.2728681137 |
| GSE19899_A1 | Up | 0.7537659136 |
| GSE19899_A2 | Up | 0.9525649528 |
| PubMed_21979375_A1 | Up | 0.5584161498 |
| PubMed_21979375_A2 | Up | 2.4469946924 |
| GSE35957 | Down | -0.0216262258 |
| GSE36640 | Down | -0.1426938965 |
| GSE54402 | Up | 0.3050457428 |
| GSE9593 | Down | -0.1976242147 |
| GSE43922 | Up | 0.3897136945 |
| GSE24585 | Down | -0.2465667062 |
| GSE37065 | Down | -0.2516811818 |
| GSE28863_A1 | Up | 0.3933093079 |
| GSE28863_A2 | Up | 0.3299078618 |
| GSE28863_A3 | Up | 0.3934083646 |
| GSE28863_A4 | Up | 0.0977038580 |
| GSE48662 | Up | 0.2058952040 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020157 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020675 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1 | MIMAT0000416 | MIRT023682 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028048 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1296-5p | MIMAT0005794 | MIRT036104 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040966 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042235 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046043 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047207 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3157-5p | MIMAT0015031 | MIRT052664 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
