HCSGD entry for CGGBP1
1. General information
| Official gene symbol | CGGBP1 |
|---|---|
| Entrez ID | 8545 |
| Gene full name | CGG triplet repeat binding protein 1 |
| Other gene symbols | CGGBP p20-CGGBP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003690 | Double-stranded DNA binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9956894495 | 0.0094762585 | 0.9999902473 | 0.1926058687 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0113819442 |
| GSE13712_SHEAR | Down | -0.0639709636 |
| GSE13712_STATIC | Down | -0.2514569719 |
| GSE19018 | Down | -0.2134172389 |
| GSE19899_A1 | Down | -0.3672288518 |
| GSE19899_A2 | Down | -0.6969854958 |
| PubMed_21979375_A1 | Down | -0.9691507746 |
| PubMed_21979375_A2 | Down | -0.7737945890 |
| GSE35957 | Up | 0.0333090451 |
| GSE36640 | Down | -0.3881310448 |
| GSE54402 | Down | -0.0434990788 |
| GSE9593 | Up | 0.0244609879 |
| GSE43922 | Down | -0.3613954778 |
| GSE24585 | Up | 0.2071692301 |
| GSE37065 | Down | -0.0135891086 |
| GSE28863_A1 | Down | -0.2547456395 |
| GSE28863_A2 | Down | -0.2565109444 |
| GSE28863_A3 | Down | -0.6732797799 |
| GSE28863_A4 | Down | -0.3871451256 |
| GSE48662 | Down | -0.6085766673 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-96-5p | MIMAT0000095 | MIRT027916 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
