HCSGD entry for LMO4

1. General information

Official gene symbolLMO4
Entrez ID8543
Gene full nameLIM domain only 4
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001158Enhancer sequence-specific DNA bindingIEAmolecular_function
GO:0001843Neural tube closureISSbiological_process
GO:0003281Ventricular septum developmentIEAbiological_process
GO:0003700Sequence-specific DNA binding transcription factor activityTASmolecular_function
GO:0005667Transcription factor complexISScellular_component
GO:0006366Transcription from RNA polymerase II promoterISSbiological_process
GO:0008134Transcription factor bindingISSmolecular_function
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0021514Ventral spinal cord interneuron differentiationIEAbiological_process
GO:0021522Spinal cord motor neuron differentiationIEAbiological_process
GO:0021527Spinal cord association neuron differentiationIEAbiological_process
GO:0031333Negative regulation of protein complex assemblyIEAbiological_process
GO:0042659Regulation of cell fate specificationIEAbiological_process
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0048538Thymus developmentIEAbiological_process
GO:0050865Regulation of cell activationIEAbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.92041537180.03588850350.99999024730.3578110985

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.5178539438
GSE13712_SHEARDown-0.3660910106
GSE13712_STATICDown-0.1471471264
GSE19018Down-0.4790041417
GSE19899_A1Down-0.0965082594
GSE19899_A2Down-0.5622896063
PubMed_21979375_A1Down-0.3163298908
PubMed_21979375_A2Down-1.1292533398
GSE35957Up0.0499844622
GSE36640Down-0.0556016839
GSE54402Up0.1641121798
GSE9593Up0.1015225453
GSE43922Up0.0509652414
GSE24585Down-0.0922198125
GSE37065Down-0.1824422042
GSE28863_A1Up0.0009510154
GSE28863_A2Down-0.2256662389
GSE28863_A3Up0.2285593458
GSE28863_A4Down-0.1663372744
GSE48662Up0.3554101527

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.