HCSGD entry for SLC45A3
1. General information
| Official gene symbol | SLC45A3 |
|---|---|
| Entrez ID | 85414 |
| Gene full name | solute carrier family 45, member 3 |
| Other gene symbols | IPCA-2 IPCA-6 IPCA-8 IPCA6 PCANAP2 PCANAP6 PCANAP8 PRST |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2928124615 | 0.4706785001 | 0.9930571834 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2144227999 |
| GSE13712_SHEAR | Up | 0.3007534856 |
| GSE13712_STATIC | Up | 0.2956170819 |
| GSE19018 | Down | -0.0375466324 |
| GSE19899_A1 | Up | 0.0704594349 |
| GSE19899_A2 | Up | 0.5669892524 |
| PubMed_21979375_A1 | Up | 0.2181259018 |
| PubMed_21979375_A2 | Up | 0.2618394460 |
| GSE35957 | Down | -0.0759096261 |
| GSE36640 | Up | 0.0244169510 |
| GSE54402 | Up | 0.3196582076 |
| GSE9593 | Down | -0.0772043734 |
| GSE43922 | Up | 0.0774727713 |
| GSE24585 | Down | -0.1921183376 |
| GSE37065 | Down | -0.0866327611 |
| GSE28863_A1 | Down | -0.2302464834 |
| GSE28863_A2 | Down | -0.0693866054 |
| GSE28863_A3 | Up | 0.2714419026 |
| GSE28863_A4 | Down | -0.1407065128 |
| GSE48662 | Down | -0.2494733502 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-138-5p | MIMAT0000430 | MIRT000797 | Western blot//Luciferase reporter assay//Reporter assay;Other | Non-Functional MTI | 18193184 |
| hsa-miR-126-3p | MIMAT0000445 | MIRT000798 | Western blot//Luciferase reporter assay//Reporter assay;Other | Non-Functional MTI | 18193184 |
| hsa-miR-126-5p | MIMAT0000444 | MIRT001820 | Western blot//Luciferase reporter assay//Reporter assay;Other | Functional MTI | 18193184 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT006716 | Immunohistochemistry//In situ hybridization//Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 22521588 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-126-5p | MIMAT0000444 | 1 | hsa-miR-126* | {Western blot} | {overexpression by miRNA mimics transfection} | 18193184 | |
| hsa-miR-126-5p | MIMAT0000444 | 2 | hsa-miR-126* | {Western blot} | {overexpression by miRNA mimics transfection} | 18193184 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
