HCSGD entry for NKD1

1. General information

Official gene symbolNKD1
Entrez ID85407
Gene full namenaked cuticle homolog 1 (Drosophila)
Other gene symbolsNaked1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000159Protein phosphatase type 2A complexIDAcellular_component
GO:0001754Eye photoreceptor cell differentiationISSbiological_process
GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0005886Plasma membraneIEAcellular_component
GO:0007525Somatic muscle developmentISSbiological_process
GO:0016055Wnt signaling pathwayIEAbiological_process
GO:0030165PDZ domain bindingIEAmolecular_function
GO:0045732Positive regulation of protein catabolic processIMPbiological_process
GO:0090090Negative regulation of canonical Wnt signaling pathwayIMP ISSbiological_process
GO:0090249Regulation of cell motility involved in somitogenic axis elongationISSbiological_process
GO:1901231Positive regulation of non-canonical Wnt signaling pathway via JNK cascadeISSbiological_process
GO:1901233Negative regulation of convergent extension involved in axis elongationISSbiological_process
GO:2000096Positive regulation of Wnt signaling pathway, planar cell polarity pathwayISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.77706206450.85275130120.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1162230853
GSE13712_SHEARUp0.0520071950
GSE13712_STATICDown-0.0013123671
GSE19018Up0.0210941985
GSE19899_A1Up0.0246997668
GSE19899_A2Up0.0705441144
PubMed_21979375_A1Down-0.0504426429
PubMed_21979375_A2Down-0.0594744702
GSE35957Up0.1536316532
GSE36640Down-0.0485780702
GSE54402Up0.0683408807
GSE9593Down-0.0731673192
GSE43922Up0.1349579294
GSE24585Down-0.0518961740
GSE37065Up0.0218831889
GSE28863_A1Down-0.0721192642
GSE28863_A2Down-0.0461691738
GSE28863_A3Up0.3333309725
GSE28863_A4Up0.0826192104
GSE48662Down-0.0356715498

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-24-3pMIMAT0000080MIRT030499MicroarrayFunctional MTI (Weak)19748357
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.