HCSGD entry for RBM17
1. General information
| Official gene symbol | RBM17 |
|---|---|
| Entrez ID | 84991 |
| Gene full name | RNA binding motif protein 17 |
| Other gene symbols | SPF45 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005681 | Spliceosomal complex | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9887604042 | 0.0496903727 | 0.9999902473 | 0.4169149777 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1173523801 |
| GSE13712_SHEAR | Down | -0.2535211606 |
| GSE13712_STATIC | Down | -0.0588598767 |
| GSE19018 | Down | -0.2531935415 |
| GSE19899_A1 | Down | -0.3984139953 |
| GSE19899_A2 | Down | -0.3347264940 |
| PubMed_21979375_A1 | Down | -0.4670554581 |
| PubMed_21979375_A2 | Down | -0.7566400798 |
| GSE35957 | Down | -0.3462933331 |
| GSE36640 | Down | -0.4965665656 |
| GSE54402 | Up | 0.0456823267 |
| GSE9593 | Down | -0.2635961938 |
| GSE43922 | Down | -0.1312008232 |
| GSE24585 | Down | -0.0471909527 |
| GSE37065 | Up | 0.0784445011 |
| GSE28863_A1 | Down | -0.0037521432 |
| GSE28863_A2 | Down | -0.0896700004 |
| GSE28863_A3 | Up | 0.0104399785 |
| GSE28863_A4 | Up | 0.1789893806 |
| GSE48662 | Down | -0.1694733785 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125a-5p | MIMAT0000443 | MIRT021290 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025594 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047489 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT047772 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
