HCSGD entry for ATOH8
1. General information
| Official gene symbol | ATOH8 |
|---|---|
| Entrez ID | 84913 |
| Gene full name | atonal homolog 8 (Drosophila) |
| Other gene symbols | HATH6 bHLHa21 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0046983 | Protein dimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9040228791 | 0.0196322784 | 0.9999902473 | 0.2729747491 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1455471903 |
| GSE13712_SHEAR | Down | -0.4100219185 |
| GSE13712_STATIC | Down | -0.4383751657 |
| GSE19018 | Down | -0.3167397584 |
| GSE19899_A1 | Down | -0.0386588627 |
| GSE19899_A2 | Up | 0.2011008892 |
| PubMed_21979375_A1 | Down | -1.1444743591 |
| PubMed_21979375_A2 | Down | -0.0581529393 |
| GSE35957 | Up | 0.0072598744 |
| GSE36640 | Up | 0.7830315040 |
| GSE54402 | Down | -0.2782310542 |
| GSE9593 | Down | -1.0131936055 |
| GSE43922 | Up | 0.0443925854 |
| GSE24585 | Down | -0.2932102780 |
| GSE37065 | Up | 0.0038982900 |
| GSE28863_A1 | Up | 0.1688477060 |
| GSE28863_A2 | Down | -1.1279022661 |
| GSE28863_A3 | Down | -0.4775255177 |
| GSE28863_A4 | Down | -0.0424059440 |
| GSE48662 | Up | 0.0947490330 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016345 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022278 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-146a-5p | MIMAT0000449 | NA | hsa-miR-146a | 19944095 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
