HCSGD entry for TBRG1
1. General information
| Official gene symbol | TBRG1 |
|---|---|
| Entrez ID | 84897 |
| Gene full name | transforming growth factor beta regulator 1 |
| Other gene symbols | NIAM TB-5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0006260 | DNA replication | IMP | biological_process |
| GO:0007050 | Cell cycle arrest | IMP | biological_process |
| GO:0008285 | Negative regulation of cell proliferation | IMP | biological_process |
| GO:0032066 | Nucleolus to nucleoplasm transport | IDA | biological_process |
| GO:0050821 | Protein stabilization | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1560675240 | 0.8735763345 | 0.7846750621 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3582362718 |
| GSE13712_SHEAR | Up | 0.0726231789 |
| GSE13712_STATIC | Down | -0.1801993885 |
| GSE19018 | Down | -0.1303494004 |
| GSE19899_A1 | Up | 0.0710580187 |
| GSE19899_A2 | Up | 0.4714358656 |
| PubMed_21979375_A1 | Up | 0.2345742017 |
| PubMed_21979375_A2 | Up | 0.2909827620 |
| GSE35957 | Down | -0.3729915007 |
| GSE36640 | Up | 0.3178517049 |
| GSE54402 | Up | 0.3829211774 |
| GSE9593 | Down | -0.0372163409 |
| GSE43922 | Up | 0.1050896623 |
| GSE24585 | Down | -0.0051414124 |
| GSE37065 | Up | 0.2920388491 |
| GSE28863_A1 | Up | 0.2488608510 |
| GSE28863_A2 | Up | 0.1647059975 |
| GSE28863_A3 | Down | -0.4571551947 |
| GSE28863_A4 | Down | -0.0001022297 |
| GSE48662 | Down | -0.2103839567 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031449 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT042360 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
