HCSGD entry for ATAD1
1. General information
| Official gene symbol | ATAD1 |
|---|---|
| Entrez ID | 84896 |
| Gene full name | ATPase family, AAA domain containing 1 |
| Other gene symbols | AFDC1 THORASE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002092 | Positive regulation of receptor internalization | ISS | biological_process |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005778 | Peroxisomal membrane | IDA | cellular_component |
| GO:0007612 | Learning | ISS | biological_process |
| GO:0007613 | Memory | ISS | biological_process |
| GO:0016887 | ATPase activity | ISS | molecular_function |
| GO:0017111 | Nucleoside-triphosphatase activity | IEA | molecular_function |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | ISS | cellular_component |
| GO:0051967 | Negative regulation of synaptic transmission, glutamatergic | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2624794879 | 0.3838690361 | 0.9560922502 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0412693196 |
| GSE13712_SHEAR | Up | 0.0701845390 |
| GSE13712_STATIC | Up | 0.3043717311 |
| GSE19018 | Down | -0.2989359096 |
| GSE19899_A1 | Down | -0.0097321319 |
| GSE19899_A2 | Down | -0.7132372094 |
| PubMed_21979375_A1 | Down | -0.2117394301 |
| PubMed_21979375_A2 | Down | -0.3743660900 |
| GSE35957 | Up | 0.7445872261 |
| GSE36640 | Up | 0.5874512732 |
| GSE54402 | Down | -0.4691012394 |
| GSE9593 | Up | 0.2713955304 |
| GSE43922 | Up | 0.2302203914 |
| GSE24585 | Down | -0.2673275292 |
| GSE37065 | Up | 0.3660328066 |
| GSE28863_A1 | Down | -0.0132697299 |
| GSE28863_A2 | Up | 0.3570929956 |
| GSE28863_A3 | Down | -0.2758747466 |
| GSE28863_A4 | Down | -0.0108360000 |
| GSE48662 | Up | 0.2365609792 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024433 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026753 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-146b-5p | MIMAT0002809 | MIRT041617 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052731 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
