HCSGD entry for C1orf198
1. General information
| Official gene symbol | C1orf198 |
|---|---|
| Entrez ID | 84886 |
| Gene full name | chromosome 1 open reading frame 198 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8934415714 | 0.0011436306 | 0.9999902473 | 0.0643294243 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -2.2612813423 |
| GSE13712_SHEAR | Down | -1.2030244945 |
| GSE13712_STATIC | Down | -0.7075387562 |
| GSE19018 | Down | -0.9830810209 |
| GSE19899_A1 | Down | -0.9780272786 |
| GSE19899_A2 | Up | 0.0968110749 |
| PubMed_21979375_A1 | Down | -1.0477480051 |
| PubMed_21979375_A2 | Up | 0.0688785574 |
| GSE35957 | Up | 1.1919843411 |
| GSE36640 | Up | 1.2769308238 |
| GSE54402 | Down | -0.5423627115 |
| GSE9593 | Up | 0.6165889027 |
| GSE43922 | Down | -0.6120159509 |
| GSE24585 | Down | -0.0763566621 |
| GSE37065 | Down | -0.3581879683 |
| GSE28863_A1 | Down | -0.3359144355 |
| GSE28863_A2 | Down | -0.1030442617 |
| GSE28863_A3 | Down | -0.3163733331 |
| GSE28863_A4 | Down | -0.4170236409 |
| GSE48662 | Down | -0.2147731725 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019596 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022692 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024382 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026464 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-31-3p | MIMAT0004504 | MIRT038936 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
