HCSGD entry for RPUSD4
1. General information
| Official gene symbol | RPUSD4 |
|---|---|
| Entrez ID | 84881 |
| Gene full name | RNA pseudouridylate synthase domain containing 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001522 | Pseudouridine synthesis | IEA | biological_process |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0009982 | Pseudouridine synthase activity | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3911759622 | 0.2261108545 | 0.9999902473 | 0.9144529258 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0781643774 |
| GSE13712_SHEAR | Down | -0.5923735889 |
| GSE13712_STATIC | Down | -0.3679643184 |
| GSE19018 | Down | -0.1248420121 |
| GSE19899_A1 | Down | -0.0122019675 |
| GSE19899_A2 | Up | 0.4107810780 |
| PubMed_21979375_A1 | Up | 1.2801010728 |
| PubMed_21979375_A2 | Up | 0.7608866486 |
| GSE35957 | Down | -0.0631268222 |
| GSE36640 | Down | -0.5809395084 |
| GSE54402 | Up | 0.5506237281 |
| GSE9593 | Down | -0.1479607068 |
| GSE43922 | Up | 0.0345952828 |
| GSE24585 | Down | -0.0367937013 |
| GSE37065 | Down | -0.1368323732 |
| GSE28863_A1 | Up | 0.0786755953 |
| GSE28863_A2 | Down | -0.0915413801 |
| GSE28863_A3 | Down | -0.6172453684 |
| GSE28863_A4 | Down | -0.0242689166 |
| GSE48662 | Down | -0.1634513021 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-151a-3p | MIMAT0000757 | MIRT019506 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-375 | MIMAT0000728 | MIRT019947 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-361-5p | MIMAT0000703 | MIRT020075 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047778 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
