HCSGD entry for PTPN5

1. General information

Official gene symbolPTPN5
Entrez ID84867
Gene full nameprotein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
Other gene symbolsPTPSTEP STEP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001784Phosphotyrosine bindingIDAmolecular_function
GO:0004725Protein tyrosine phosphatase activityIEA TASmolecular_function
GO:0005789Endoplasmic reticulum membraneIEAcellular_component
GO:0006470Protein dephosphorylationTASbiological_process
GO:0016021Integral component of membraneTAScellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.68202203940.83014176510.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0413273301
GSE13712_SHEARDown-0.0649821304
GSE13712_STATICUp0.0610227876
GSE19018Up0.0818506928
GSE19899_A1Up0.1583886581
GSE19899_A2Up0.0501163312
PubMed_21979375_A1Up0.0077462825
PubMed_21979375_A2Up0.1022433700
GSE35957Up0.1379958878
GSE36640Up0.1023860511
GSE54402Up0.0675031484
GSE9593Down-0.1209694319
GSE43922Down-0.0561483831
GSE24585Down-0.0228689276
GSE37065Down-0.0687831896
GSE28863_A1Down-0.1717390224
GSE28863_A2Down-0.0234327261
GSE28863_A3Up0.3579900144
GSE28863_A4Up0.1267793645
GSE48662Down-0.0957338117

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.