HCSGD entry for ZNF496
1. General information
| Official gene symbol | ZNF496 |
|---|---|
| Entrez ID | 84838 |
| Gene full name | zinc finger protein 496 |
| Other gene symbols | NIZP1 ZFP496 ZKSCAN17 ZSCAN49 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0000981 | Sequence-specific DNA binding RNA polymerase II transcription factor activity | IBA | molecular_function |
| GO:0003677 | DNA binding | ISS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IBA ISS | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0016604 | Nuclear body | IEA | cellular_component |
| GO:0043621 | Protein self-association | IEA | molecular_function |
| GO:0045893 | Positive regulation of transcription, DNA-templated | ISS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9664608412 | 0.1130301204 | 0.9999902473 | 0.6442325249 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0958811833 |
| GSE13712_SHEAR | Down | -0.4773636112 |
| GSE13712_STATIC | Down | -0.1112550036 |
| GSE19018 | Down | -0.0855367379 |
| GSE19899_A1 | Down | -0.1105322009 |
| GSE19899_A2 | Down | -0.4691119749 |
| PubMed_21979375_A1 | Down | -0.7233741818 |
| PubMed_21979375_A2 | Down | -0.3134862172 |
| GSE35957 | Down | -0.0809948495 |
| GSE36640 | Down | -0.7219712503 |
| GSE54402 | Down | -0.0714526065 |
| GSE9593 | Down | -0.0112782627 |
| GSE43922 | Up | 0.0487888455 |
| GSE24585 | Down | -0.1290787125 |
| GSE37065 | Down | -0.0959598149 |
| GSE28863_A1 | Up | 0.1639747486 |
| GSE28863_A2 | Up | 0.0366854637 |
| GSE28863_A3 | Up | 0.0414629547 |
| GSE28863_A4 | Down | -0.0837920205 |
| GSE48662 | Up | 0.4818722441 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044474 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
