HCSGD entry for TRIM55

1. General information

Official gene symbolTRIM55
Entrez ID84675
Gene full nametripartite motif containing 55
Other gene symbolsMURF-2 RNF29 muRF2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004871Signal transducer activityNASmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005874MicrotubuleNAScellular_component
GO:0007165Signal transductionNASbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0042802Identical protein bindingIPImolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.34914606590.15439878420.99999024730.7593955726

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1512508577
GSE13712_SHEARDown-0.0152365804
GSE13712_STATICDown-0.1358449587
GSE19018Down-1.0254344110
GSE19899_A1Down-0.4546532779
GSE19899_A2Up1.5118714828
PubMed_21979375_A1Down-0.0974068963
PubMed_21979375_A2Down-0.6355551416
GSE35957Down-0.0470215704
GSE36640Down-2.2913773528
GSE54402Up0.5006543264
GSE9593Up0.1397398060
GSE43922Up0.0243400652
GSE24585Up0.2897758448
GSE37065Up0.0279596077
GSE28863_A1Up0.0538841692
GSE28863_A2Up0.1750415190
GSE28863_A3Up0.0064378948
GSE28863_A4Up0.0032329658
GSE48662Up0.0266533427

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.