HCSGD entry for GLYR1
1. General information
| Official gene symbol | GLYR1 |
|---|---|
| Entrez ID | 84656 |
| Gene full name | glyoxylate reductase 1 homolog (Arabidopsis) |
| Other gene symbols | BM045 HIBDL N-PAC NP60 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0004616 | Phosphogluconate dehydrogenase (decarboxylating) activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006098 | Pentose-phosphate shunt | IEA | biological_process |
| GO:0016491 | Oxidoreductase activity | IEA | molecular_function |
| GO:0035064 | Methylated histone residue binding | IDA | molecular_function |
| GO:0050662 | Coenzyme binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3244194635 | 0.7936977091 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0478760529 |
| GSE13712_SHEAR | Down | -0.1961111124 |
| GSE13712_STATIC | Down | -0.0077244198 |
| GSE19018 | Down | -0.1472994959 |
| GSE19899_A1 | Up | 0.0584425943 |
| GSE19899_A2 | Up | 0.3515160701 |
| PubMed_21979375_A1 | Up | 0.1091911116 |
| PubMed_21979375_A2 | Down | -0.5075055655 |
| GSE35957 | Up | 0.2050736233 |
| GSE36640 | Up | 0.2607477191 |
| GSE54402 | Up | 0.1609981904 |
| GSE9593 | Up | 0.0298682856 |
| GSE43922 | Up | 0.0009828412 |
| GSE24585 | Up | 0.1648954702 |
| GSE37065 | Down | -0.0560669813 |
| GSE28863_A1 | Up | 0.1524152268 |
| GSE28863_A2 | Down | -0.0125926250 |
| GSE28863_A3 | Down | -0.0829466103 |
| GSE28863_A4 | Up | 0.1397875209 |
| GSE48662 | Up | 0.2031788035 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-24-3p | MIMAT0000080 | MIRT030400 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037154 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046910 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
