HCSGD entry for PGBD1

1. General information

Official gene symbolPGBD1
Entrez ID84547
Gene full namepiggyBac transposable element derived 1
Other gene symbolsHUCEP-4 SCAND4 dJ874C20.4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005044Scavenger receptor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0016020MembraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.95968084420.01358406600.99999024730.2297854756

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0330933630
GSE13712_SHEARDown-0.1517164863
GSE13712_STATICDown-0.1911162158
GSE19018Down-0.0756219166
GSE19899_A1Down-0.3121902764
GSE19899_A2Down-2.7566081304
PubMed_21979375_A1Down-0.9810386698
PubMed_21979375_A2Down-1.8626247153
GSE35957Down-0.6684185976
GSE36640Down-1.4145903074
GSE54402Up0.0295987468
GSE9593Down-0.1819338951
GSE43922Down-0.3461305120
GSE24585Up0.1967455943
GSE37065Down-0.0270931451
GSE28863_A1Up0.1158143311
GSE28863_A2Up0.6226791919
GSE28863_A3Down-0.0265516901
GSE28863_A4Down-0.0487193624
GSE48662Down-0.2347061923

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.