HCSGD entry for DHX16
1. General information
| Official gene symbol | DHX16 |
|---|---|
| Entrez ID | 8449 |
| Gene full name | DEAH (Asp-Glu-Ala-His) box polypeptide 16 |
| Other gene symbols | DBP2 DDX16 PRO2014 PRP8 PRPF2 Prp2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003724 | RNA helicase activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
| GO:0008380 | RNA splicing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1022592113 | 0.8698011474 | 0.6660640188 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2120228373 |
| GSE13712_SHEAR | Down | -0.2353137315 |
| GSE13712_STATIC | Down | -0.0228754747 |
| GSE19018 | Down | -0.0540464073 |
| GSE19899_A1 | Up | 0.0684508088 |
| GSE19899_A2 | Up | 0.6956299240 |
| PubMed_21979375_A1 | Up | 0.2024743951 |
| PubMed_21979375_A2 | Up | 0.9205148762 |
| GSE35957 | Down | -0.2885373788 |
| GSE36640 | Up | 0.0319078035 |
| GSE54402 | Up | 0.3222251747 |
| GSE9593 | Down | -0.2421845016 |
| GSE43922 | Up | 0.0085000623 |
| GSE24585 | Up | 0.1198292105 |
| GSE37065 | Down | -0.1687476904 |
| GSE28863_A1 | Up | 0.5844192517 |
| GSE28863_A2 | Up | 0.7614272819 |
| GSE28863_A3 | Up | 0.0719874167 |
| GSE28863_A4 | Down | -0.0998285475 |
| GSE48662 | Down | -0.1094416429 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032275 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-107 | MIMAT0000104 | MIRT048294 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049188 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
