HCSGD entry for CYSTM1
1. General information
| Official gene symbol | CYSTM1 |
|---|---|
| Entrez ID | 84418 |
| Gene full name | cysteine-rich transmembrane module containing 1 |
| Other gene symbols | C5orf32 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0001177501 | 0.9995377493 | 0.0300902913 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.2622587859 |
| GSE13712_SHEAR | Down | -0.1560034242 |
| GSE13712_STATIC | Up | 0.1334726322 |
| GSE19018 | Up | 1.3089384365 |
| GSE19899_A1 | Up | 1.2102213192 |
| GSE19899_A2 | Up | 1.7139747004 |
| PubMed_21979375_A1 | Up | 1.8366810771 |
| PubMed_21979375_A2 | Up | 1.6936952121 |
| GSE35957 | Up | 0.1528586257 |
| GSE36640 | Up | 2.2343282373 |
| GSE54402 | Up | 0.6970811908 |
| GSE9593 | Up | 1.0257862325 |
| GSE43922 | Up | 0.4003616887 |
| GSE24585 | Up | 0.2508770632 |
| GSE37065 | Up | 0.4245870580 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1156781819 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016046 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT041954 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052215 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
