HCSGD entry for PCGF5
1. General information
| Official gene symbol | PCGF5 |
|---|---|
| Entrez ID | 84333 |
| Gene full name | polycomb group ring finger 5 |
| Other gene symbols | RNF159 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0031519 | PcG protein complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8412428593 | 0.0253449109 | 0.9999902473 | 0.3063668503 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5951421679 |
| GSE13712_SHEAR | Up | 0.0408708975 |
| GSE13712_STATIC | Up | 0.1499604470 |
| GSE19018 | Up | 0.1467403271 |
| GSE19899_A1 | Down | -0.7208530293 |
| GSE19899_A2 | Down | -0.6784637510 |
| PubMed_21979375_A1 | Down | -0.7555469588 |
| PubMed_21979375_A2 | Down | -0.8943594435 |
| GSE35957 | Up | 0.4751059360 |
| GSE36640 | Down | -0.1205657955 |
| GSE54402 | Down | -0.2369293986 |
| GSE9593 | Up | 0.1689384553 |
| GSE43922 | Down | -1.2946918266 |
| GSE24585 | Down | -0.5051408047 |
| GSE37065 | Up | 0.2035376437 |
| GSE28863_A1 | Up | 0.0104549975 |
| GSE28863_A2 | Up | 0.3964647661 |
| GSE28863_A3 | Down | -0.2936209698 |
| GSE28863_A4 | Up | 0.1985238012 |
| GSE48662 | Up | 0.1386933983 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT003815 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-375 | MIMAT0000728 | MIRT019923 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024913 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026591 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049737 | CLASH//Luciferase reporter assay | Functional MTI | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT051046 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
