HCSGD entry for CHCHD6
1. General information
| Official gene symbol | CHCHD6 |
|---|---|
| Entrez ID | 84303 |
| Gene full name | coiled-coil-helix-coiled-coil-helix domain containing 6 |
| Other gene symbols | CHCM1 PPP1R23 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IMP | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | IDA | cellular_component |
| GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
| GO:0042407 | Cristae formation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9753094145 | 0.0503339729 | 0.9999902473 | 0.4201841104 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0516764555 |
| GSE13712_SHEAR | Down | -0.2296675246 |
| GSE13712_STATIC | Down | -0.0676843649 |
| GSE19018 | Down | -0.0654798642 |
| GSE19899_A1 | Down | -0.3548214599 |
| GSE19899_A2 | Down | -0.9876760780 |
| PubMed_21979375_A1 | Down | -0.5494109289 |
| PubMed_21979375_A2 | Down | -0.7531854103 |
| GSE35957 | Down | -0.4301998286 |
| GSE36640 | Up | 0.1726991557 |
| GSE54402 | Down | -0.2832315404 |
| GSE9593 | Up | 0.2796275789 |
| GSE43922 | Down | -0.2114169457 |
| GSE24585 | Down | -0.3110747536 |
| GSE37065 | Down | -0.1042549695 |
| GSE28863_A1 | Down | -0.1262339897 |
| GSE28863_A2 | Up | 0.0381194892 |
| GSE28863_A3 | Up | 0.0869313893 |
| GSE28863_A4 | Up | 0.1013044413 |
| GSE48662 | Up | 0.0758167017 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-296-3p | MIMAT0004679 | MIRT038493 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
