HCSGD entry for PHF6
1. General information
| Official gene symbol | PHF6 |
|---|---|
| Entrez ID | 84295 |
| Gene full name | PHD finger protein 6 |
| Other gene symbols | BFLS BORJ CENP-31 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7228338513 | 0.3994370655 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0233154624 |
| GSE13712_SHEAR | Up | 0.1495974409 |
| GSE13712_STATIC | Down | -0.2651531698 |
| GSE19018 | Up | 0.2912054217 |
| GSE19899_A1 | Up | 0.0764733706 |
| GSE19899_A2 | Down | -0.0915351841 |
| PubMed_21979375_A1 | Up | 0.4518765764 |
| PubMed_21979375_A2 | Down | -0.2275698671 |
| GSE35957 | Down | -0.0060382503 |
| GSE36640 | Down | -0.2096673131 |
| GSE54402 | Up | 0.0417776214 |
| GSE9593 | Down | -0.2276956628 |
| GSE43922 | Down | -0.0018196181 |
| GSE24585 | Down | -0.2431130971 |
| GSE37065 | Up | 0.0004962708 |
| GSE28863_A1 | Down | -0.1273806009 |
| GSE28863_A2 | Down | -0.0014379547 |
| GSE28863_A3 | Down | -0.5262154567 |
| GSE28863_A4 | Up | 0.1961326011 |
| GSE48662 | Up | 0.3514119758 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020833 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022787 | Proteomics | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024322 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026628 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052389 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
