HCSGD entry for ZCCHC9
1. General information
| Official gene symbol | ZCCHC9 |
|---|---|
| Entrez ID | 84240 |
| Gene full name | zinc finger, CCHC domain containing 9 |
| Other gene symbols | PPP1R41 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0010923 | Negative regulation of phosphatase activity | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6086246419 | 0.6282323050 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2096091966 |
| GSE13712_SHEAR | Up | 0.1200965342 |
| GSE13712_STATIC | Up | 0.1294251766 |
| GSE19018 | Up | 0.1656524053 |
| GSE19899_A1 | Down | -0.0632745349 |
| GSE19899_A2 | Up | 0.0552454157 |
| PubMed_21979375_A1 | Up | 0.0094211198 |
| PubMed_21979375_A2 | Down | -0.0030824862 |
| GSE35957 | Down | -0.0938318837 |
| GSE36640 | Down | -0.2564702040 |
| GSE54402 | Up | 0.0958490183 |
| GSE9593 | Down | -0.0948776100 |
| GSE43922 | Down | -0.0054295545 |
| GSE24585 | Up | 0.1717370578 |
| GSE37065 | Down | -0.2074890467 |
| GSE28863_A1 | Down | -0.0205615504 |
| GSE28863_A2 | Up | 0.0904218914 |
| GSE28863_A3 | Down | -0.0217814591 |
| GSE28863_A4 | Up | 0.0234222483 |
| GSE48662 | Down | -0.2334479530 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT052011 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052387 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
