HCSGD entry for RGPD5
1. General information
| Official gene symbol | RGPD5 |
|---|---|
| Entrez ID | 84220 |
| Gene full name | RANBP2-like and GRIP domain containing 5 |
| Other gene symbols | BS-63 BS63 RGP5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000042 | Protein targeting to Golgi | IEA | biological_process |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9260925687 | 0.2014188139 | 0.9999902473 | 0.8681094809 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1391296697 |
| GSE13712_SHEAR | Up | 0.0887188289 |
| GSE13712_STATIC | Down | -0.2837319532 |
| GSE19018 | Down | -0.0781891734 |
| GSE19899_A1 | Down | -0.0795438504 |
| GSE19899_A2 | Up | 0.1519853896 |
| PubMed_21979375_A1 | Up | 0.0726080761 |
| PubMed_21979375_A2 | Down | -0.1472421512 |
| GSE35957 | Up | 0.2095578687 |
| GSE36640 | Down | -0.2072473268 |
| GSE54402 | Down | -0.0328784459 |
| GSE9593 | Up | 0.1021246633 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1192851351 |
| GSE28863_A2 | Up | 0.2844310433 |
| GSE28863_A3 | Down | -0.6250900984 |
| GSE28863_A4 | Down | -0.2899217618 |
| GSE48662 | Down | -0.1260704632 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-3p | MIMAT0004509 | MIRT038772 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15a-5p | MIMAT0000068 | MIRT051322 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
