HCSGD entry for GTF2IRD2
1. General information
| Official gene symbol | GTF2IRD2 |
|---|---|
| Entrez ID | 84163 |
| Gene full name | GTF2I repeat domain containing 2 |
| Other gene symbols | FP630 GTF2IRD2A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9822311082 | 0.0424955321 | 0.9999902473 | 0.3877461538 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2470956326 |
| GSE13712_SHEAR | Down | -0.2314717228 |
| GSE13712_STATIC | Down | -0.3254680092 |
| GSE19018 | Up | 0.1142082169 |
| GSE19899_A1 | Down | -0.4879249890 |
| GSE19899_A2 | Down | -0.1126054409 |
| PubMed_21979375_A1 | Down | -0.5691187259 |
| PubMed_21979375_A2 | Down | -0.4903208328 |
| GSE35957 | Down | -0.4175506542 |
| GSE36640 | Down | -0.1160499831 |
| GSE54402 | Down | -0.4892208870 |
| GSE9593 | Down | -0.3630477970 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.2433760648 |
| GSE28863_A2 | Up | 0.0910627580 |
| GSE28863_A3 | Up | 0.1002198809 |
| GSE28863_A4 | Down | -0.2392306950 |
| GSE48662 | Up | 0.2982784203 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029267 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
