HCSGD entry for ARID5B

1. General information

Official gene symbolARID5B
Entrez ID84159
Gene full nameAT rich interactive domain 5B (MRF1-like)
Other gene symbolsDESRT MRF-2 MRF2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001822Kidney developmentIEAbiological_process
GO:0001889Liver developmentTASbiological_process
GO:0003677DNA bindingIDAmolecular_function
GO:0003713Transcription coactivator activityIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0008584Male gonad developmentIEAbiological_process
GO:0008585Female gonad developmentIEAbiological_process
GO:0009791Post-embryonic developmentIEAbiological_process
GO:0010761Fibroblast migrationIEAbiological_process
GO:0030325Adrenal gland developmentIEAbiological_process
GO:0035264Multicellular organism growthIEAbiological_process
GO:0044212Transcription regulatory region DNA bindingIDAmolecular_function
GO:0045444Fat cell differentiationIEAbiological_process
GO:0045892Negative regulation of transcription, DNA-templatedTASbiological_process
GO:0048008Platelet-derived growth factor receptor signaling pathwayIEAbiological_process
GO:0048468Cell developmentIEAbiological_process
GO:0048644Muscle organ morphogenesisIEAbiological_process
GO:0048705Skeletal system morphogenesisIEAbiological_process
GO:0051091Positive regulation of sequence-specific DNA binding transcription factor activityIDAbiological_process
GO:0060021Palate developmentIEAbiological_process
GO:0060325Face morphogenesisIEAbiological_process
GO:0060612Adipose tissue developmentISSbiological_process
GO:0060613Fat pad developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.57392951260.00589592720.99999024730.1551324351

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.6065906821
GSE13712_SHEARDown-0.3017793066
GSE13712_STATICDown-0.2487798172
GSE19018Down-0.0077440404
GSE19899_A1Down-0.5860220539
GSE19899_A2Down-1.3634014054
PubMed_21979375_A1Down-1.9499274952
PubMed_21979375_A2Down-1.0232569340
GSE35957Up0.5409940948
GSE36640Down-0.0713134221
GSE54402Down-1.9760346467
GSE9593Up0.2012597472
GSE43922Down-1.0654866795
GSE24585Up0.7195751819
GSE37065Down-0.0423233642
GSE28863_A1Up1.1149918895
GSE28863_A2Up0.5071520237
GSE28863_A3Down-0.3482074687
GSE28863_A4Down-0.0684433087
GSE48662Down-0.2782970686

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-128-3pMIMAT0000424MIRT022013SequencingFunctional MTI (Weak)20371350
hsa-miR-101-3pMIMAT0000099MIRT027302SequencingFunctional MTI (Weak)20371350
hsa-miR-22-3pMIMAT0000077MIRT030642SequencingFunctional MTI (Weak)20371350
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.