HCSGD entry for ARL6

1. General information

Official gene symbolARL6
Entrez ID84100
Gene full nameADP-ribosylation factor-like 6
Other gene symbolsBBS3 RP55
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005525GTP bindingIEAmolecular_function
GO:0005543Phospholipid bindingISSmolecular_function
GO:0005737CytoplasmIEA ISScellular_component
GO:0005879Axonemal microtubuleISScellular_component
GO:0005930AxonemeISScellular_component
GO:0006612Protein targeting to membraneISSbiological_process
GO:0007264Small GTPase mediated signal transductionIEAbiological_process
GO:0007368Determination of left/right symmetryISSbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0016020MembraneIEA ISScellular_component
GO:0016055Wnt signaling pathwayIMPbiological_process
GO:0030117Membrane coatISScellular_component
GO:0032402Melanosome transportISSbiological_process
GO:0034464BBSomeISScellular_component
GO:0042384Cilium assemblyIMP ISSbiological_process
GO:0045444Fat cell differentiationIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
GO:0051258Protein polymerizationISSbiological_process
GO:0060170Ciliary membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.02795078450.51326627410.38723663161.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2698886792
GSE13712_SHEARUp0.1717503136
GSE13712_STATICDown-0.1112578886
GSE19018Up0.1492443889
GSE19899_A1Up1.0813861640
GSE19899_A2Up0.5106148525
PubMed_21979375_A1Up1.9053324065
PubMed_21979375_A2Up0.7146172051
GSE35957Up0.0948489224
GSE36640Up0.5921019557
GSE54402Up0.5795747288
GSE9593Down-0.3145525433
GSE43922Up0.6488727344
GSE24585Up0.0747600358
GSE37065Up0.0015079727
GSE28863_A1Down-0.5312202354
GSE28863_A2Up0.2833867678
GSE28863_A3Down-0.3104520153
GSE28863_A4Down-0.3197183559
GSE48662Down-0.2277905334

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-218-5pMIMAT0000275MIRT046980CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.