HCSGD entry for KATNAL1
1. General information
| Official gene symbol | KATNAL1 |
|---|---|
| Entrez ID | 84056 |
| Gene full name | katanin p60 subunit A-like 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0008017 | Microtubule binding | IEA | molecular_function |
| GO:0008568 | Microtubule-severing ATPase activity | IEA | molecular_function |
| GO:0051013 | Microtubule severing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0154024049 | 0.9584560997 | 0.3090131098 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4210817610 |
| GSE13712_SHEAR | Up | 0.2127375807 |
| GSE13712_STATIC | Up | 0.0748468847 |
| GSE19018 | Up | 0.9206539647 |
| GSE19899_A1 | Up | 0.2846038427 |
| GSE19899_A2 | Up | 0.1186013551 |
| PubMed_21979375_A1 | Up | 0.6487389751 |
| PubMed_21979375_A2 | Down | -0.0158627382 |
| GSE35957 | Up | 0.2504671892 |
| GSE36640 | Up | 0.6060103645 |
| GSE54402 | Up | 0.6322247083 |
| GSE9593 | Up | 0.4555608121 |
| GSE43922 | Up | 0.1195047338 |
| GSE24585 | Up | 0.0437403304 |
| GSE37065 | Down | -0.0902521253 |
| GSE28863_A1 | Up | 0.3719562195 |
| GSE28863_A2 | Up | 0.4486658338 |
| GSE28863_A3 | Down | -0.2471778714 |
| GSE28863_A4 | Up | 0.0420178530 |
| GSE48662 | Up | 0.1241429486 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020108 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020462 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021101 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023241 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024243 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026049 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026226 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT026999 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027967 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031106 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031447 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032145 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-548h-5p | MIMAT0005928 | MIRT035837 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-548j-5p | MIMAT0005875 | MIRT035907 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051628 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
