HCSGD entry for TMTC1
1. General information
| Official gene symbol | TMTC1 |
|---|---|
| Entrez ID | 83857 |
| Gene full name | transmembrane and tetratricopeptide repeat containing 1 |
| Other gene symbols | OLF TMTC1A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0100192812 | 0.0119649747 | 0.2550459381 | 0.2162957476 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.8124090499 |
| GSE13712_SHEAR | Up | 0.1153066912 |
| GSE13712_STATIC | Down | -0.0397436510 |
| GSE19018 | Down | -0.7670774331 |
| GSE19899_A1 | Down | -1.2070070585 |
| GSE19899_A2 | Down | -0.4510861956 |
| PubMed_21979375_A1 | Down | -0.9750561242 |
| PubMed_21979375_A2 | Down | -0.4266943712 |
| GSE35957 | Down | -1.2239340821 |
| GSE36640 | Up | 2.2534011475 |
| GSE54402 | Down | -1.5565581196 |
| GSE9593 | Up | 1.1663979190 |
| GSE43922 | Down | -0.5370495517 |
| GSE24585 | Down | -0.1855227454 |
| GSE37065 | Up | 0.4216264220 |
| GSE28863_A1 | Down | -0.7370788986 |
| GSE28863_A2 | Up | 1.6503497419 |
| GSE28863_A3 | Up | 0.6537962271 |
| GSE28863_A4 | Up | 0.5913340029 |
| GSE48662 | Up | 0.4179282547 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016438 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-320a | MIMAT0000510 | MIRT044820 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046239 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
