HCSGD entry for HIST1H3B
1. General information
| Official gene symbol | HIST1H3B |
|---|---|
| Entrez ID | 8358 |
| Gene full name | histone cluster 1, H3b |
| Other gene symbols | H3/l H3FL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9427625812 | 0.0006160556 | 0.9999902473 | 0.0464551136 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0071379321 |
| GSE13712_SHEAR | Up | 0.1817228989 |
| GSE13712_STATIC | Down | -0.2274647543 |
| GSE19018 | Down | -0.1909462891 |
| GSE19899_A1 | Down | -0.0118682798 |
| GSE19899_A2 | Down | -0.3212153334 |
| PubMed_21979375_A1 | Down | -1.8663961770 |
| PubMed_21979375_A2 | Down | -0.2435368087 |
| GSE35957 | Up | 0.0338807592 |
| GSE36640 | Down | -5.6096277676 |
| GSE54402 | Down | -1.0545847234 |
| GSE9593 | Down | -0.3003439696 |
| GSE43922 | Down | -2.8911634068 |
| GSE24585 | Down | -0.4429528933 |
| GSE37065 | Down | -1.7361509820 |
| GSE28863_A1 | Down | -0.4263272592 |
| GSE28863_A2 | Up | 1.5462709121 |
| GSE28863_A3 | Down | -0.2705672422 |
| GSE28863_A4 | Down | -0.1348130085 |
| GSE48662 | Down | -0.6138611057 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT002746 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025549 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037316 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039555 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041347 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-330-3p | MIMAT0000751 | MIRT043828 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044526 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048813 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23a-3p | MIMAT0000078 | MIRT050425 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052057 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3909 | MIMAT0018183 | MIRT052884 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
