HCSGD entry for INO80B
1. General information
| Official gene symbol | INO80B |
|---|---|
| Entrez ID | 83444 |
| Gene full name | INO80 complex subunit B |
| Other gene symbols | HMGA1L4 HMGIYL4 IES2 PAP-1BP PAPA-1 ZNHIT4 hIes2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:0006310 | DNA recombination | IEA | biological_process |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0031011 | Ino80 complex | IDA IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1073732457 | 0.8792833327 | 0.6803901541 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0232586985 |
| GSE13712_SHEAR | Down | -0.8992177917 |
| GSE13712_STATIC | Up | 0.1920823527 |
| GSE19018 | Down | -0.1088370249 |
| GSE19899_A1 | Up | 0.2127149564 |
| GSE19899_A2 | Up | 0.9498180554 |
| PubMed_21979375_A1 | Up | 1.1282299338 |
| PubMed_21979375_A2 | Up | 0.6792600843 |
| GSE35957 | Down | -0.1083439227 |
| GSE36640 | Up | 0.1964459865 |
| GSE54402 | Up | 0.3091939500 |
| GSE9593 | Up | 0.0490281530 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1224182106 |
| GSE28863_A2 | Up | 0.0384980176 |
| GSE28863_A3 | Down | -0.0392660460 |
| GSE28863_A4 | Down | -0.0183649098 |
| GSE48662 | Up | 0.4078577424 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018307 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-484 | MIMAT0002174 | MIRT042253 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181b-5p | MIMAT0000257 | MIRT047255 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
