HCSGD entry for SH3BGRL3
1. General information
| Official gene symbol | SH3BGRL3 |
|---|---|
| Entrez ID | 83442 |
| Gene full name | SH3 domain binding glutamic acid-rich protein like 3 |
| Other gene symbols | SH3BP-1 TIP-B1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0009055 | Electron carrier activity | IEA | molecular_function |
| GO:0015035 | Protein disulfide oxidoreductase activity | IEA | molecular_function |
| GO:0045454 | Cell redox homeostasis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1585308803 | 0.6613907754 | 0.7897946064 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1193023243 |
| GSE13712_SHEAR | Up | 0.0167326992 |
| GSE13712_STATIC | Up | 0.1563842581 |
| GSE19018 | Up | 0.7550782473 |
| GSE19899_A1 | Up | 0.0297579644 |
| GSE19899_A2 | Up | 0.2236045477 |
| PubMed_21979375_A1 | Up | 1.0215689877 |
| PubMed_21979375_A2 | Up | 0.1447099388 |
| GSE35957 | Down | -0.2048374262 |
| GSE36640 | Up | 0.1260978419 |
| GSE54402 | Up | 0.0965845891 |
| GSE9593 | Up | 0.5548506916 |
| GSE43922 | Up | 0.0075585483 |
| GSE24585 | Up | 0.0990806745 |
| GSE37065 | Down | -0.0107317688 |
| GSE28863_A1 | Down | -0.4373425440 |
| GSE28863_A2 | Down | -0.2177721886 |
| GSE28863_A3 | Down | -0.1717188067 |
| GSE28863_A4 | Down | -0.1653730176 |
| GSE48662 | Up | 0.0488083279 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001334 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025471 | Proteomics | Functional MTI (Weak) | 21566225 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
