HCSGD entry for HIST2H2AA3
1. General information
| Official gene symbol | HIST2H2AA3 |
|---|---|
| Entrez ID | 8337 |
| Gene full name | histone cluster 2, H2aa3 |
| Other gene symbols | H2A H2A.2 H2A/O H2A/q H2AFO H2a-615 HIST2H2AA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0042996391 | 0.5535237719 | 0.1760215926 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5023837947 |
| GSE13712_SHEAR | Up | 1.0286217051 |
| GSE13712_STATIC | Up | 0.2219214034 |
| GSE19018 | Up | 0.7565798554 |
| GSE19899_A1 | Up | 0.3038162139 |
| GSE19899_A2 | Up | 2.0606243570 |
| PubMed_21979375_A1 | Up | 3.4553174356 |
| PubMed_21979375_A2 | Up | 1.4936374743 |
| GSE35957 | Up | 0.2847682337 |
| GSE36640 | Down | -0.6781405594 |
| GSE54402 | Up | 0.4479328712 |
| GSE9593 | Down | -0.0712593806 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.8675841848 |
| GSE28863_A2 | Down | -1.0609072763 |
| GSE28863_A3 | Up | 0.1590952088 |
| GSE28863_A4 | Down | -0.0018642346 |
| GSE48662 | - | - |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025387 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-320c | MIMAT0005793 | MIRT036169 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-940 | MIMAT0004983 | MIRT036592 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037476 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-671-5p | MIMAT0003880 | MIRT039268 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039626 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040781 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041606 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-425-3p | MIMAT0001343 | MIRT042417 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-424-5p | MIMAT0001341 | MIRT042440 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044615 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045401 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048399 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049338 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050188 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050242 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050850 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-2277-5p | MIMAT0017352 | MIRT052846 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
