HCSGD entry for COLQ
1. General information
| Official gene symbol | COLQ |
|---|---|
| Entrez ID | 8292 |
| Gene full name | collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase |
| Other gene symbols | EAD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001507 | Acetylcholine catabolic process in synaptic cleft | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005581 | Collagen | IEA | cellular_component |
| GO:0005605 | Basal lamina | TAS | cellular_component |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0008105 | Asymmetric protein localization | TAS | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0045202 | Synapse | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5498084685 | 0.7747105619 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0362599635 |
| GSE13712_SHEAR | Up | 0.0547876217 |
| GSE13712_STATIC | Up | 0.0371837218 |
| GSE19018 | Up | 0.0256614911 |
| GSE19899_A1 | Down | -0.0289263835 |
| GSE19899_A2 | Up | 0.3439844858 |
| PubMed_21979375_A1 | Down | -0.1382282046 |
| PubMed_21979375_A2 | Up | 0.0883232112 |
| GSE35957 | Up | 0.0311364883 |
| GSE36640 | Up | 0.0133426864 |
| GSE54402 | Down | -0.0363678144 |
| GSE9593 | Up | 0.0182721831 |
| GSE43922 | Up | 0.0133523474 |
| GSE24585 | Down | -0.3176425211 |
| GSE37065 | Up | 0.2118066149 |
| GSE28863_A1 | Down | -0.0018478356 |
| GSE28863_A2 | Up | 0.1183405855 |
| GSE28863_A3 | Up | 0.2204385275 |
| GSE28863_A4 | Up | 0.1627583920 |
| GSE48662 | Down | -0.0095667010 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017367 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
