HCSGD entry for DPF1
1. General information
| Official gene symbol | DPF1 |
|---|---|
| Entrez ID | 8193 |
| Gene full name | D4, zinc and double PHD fingers family 1 |
| Other gene symbols | BAF45b NEUD4 neuro-d4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006915 | Apoptotic process | TAS | biological_process |
| GO:0007399 | Nervous system development | IEA ISS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0071565 | NBAF complex | IEA ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9143650089 | 0.1340556248 | 0.9999902473 | 0.7052285971 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1513315064 |
| GSE13712_SHEAR | Down | -0.0606104338 |
| GSE13712_STATIC | Down | -0.3556790927 |
| GSE19018 | Up | 0.0749917881 |
| GSE19899_A1 | Down | -0.1791091601 |
| GSE19899_A2 | Down | -0.0459725064 |
| PubMed_21979375_A1 | Down | -0.5828347796 |
| PubMed_21979375_A2 | Down | -0.2267361284 |
| GSE35957 | Down | -0.2218875483 |
| GSE36640 | Down | -0.1992152797 |
| GSE54402 | Down | -0.0004385072 |
| GSE9593 | Up | 0.1519281785 |
| GSE43922 | Down | -0.0433982183 |
| GSE24585 | Up | 0.5460372254 |
| GSE37065 | Down | -0.1237483930 |
| GSE28863_A1 | Down | -0.2425678021 |
| GSE28863_A2 | Down | -0.1940516634 |
| GSE28863_A3 | Up | 0.2658404619 |
| GSE28863_A4 | Up | 0.0430699497 |
| GSE48662 | Down | -0.0880458640 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040773 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046214 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-212-3p | MIMAT0000269 | MIRT047000 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
