HCSGD entry for SBF2
1. General information
| Official gene symbol | SBF2 |
|---|---|
| Entrez ID | 81846 |
| Gene full name | SET binding factor 2 |
| Other gene symbols | CMT4B2 DENND7B MTMR13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005774 | Vacuolar membrane | IEA | cellular_component |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0016791 | Phosphatase activity | IEA | molecular_function |
| GO:0017112 | Rab guanyl-nucleotide exchange factor activity | IDA | molecular_function |
| GO:0019208 | Phosphatase regulator activity | IEA | molecular_function |
| GO:0019902 | Phosphatase binding | IEA | molecular_function |
| GO:0032313 | Regulation of Rab GTPase activity | IDA | biological_process |
| GO:0032318 | Regulation of Ras GTPase activity | IDA | biological_process |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
| GO:0042552 | Myelination | NAS | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0043087 | Regulation of GTPase activity | IDA | biological_process |
| GO:0051262 | Protein tetramerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8343822385 | 0.0338871243 | 0.9999902473 | 0.3473277929 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5347551028 |
| GSE13712_SHEAR | Down | -0.0593810964 |
| GSE13712_STATIC | Down | -0.2209363544 |
| GSE19018 | Up | 0.5173447620 |
| GSE19899_A1 | Down | -0.5849476500 |
| GSE19899_A2 | Down | -0.4722795419 |
| PubMed_21979375_A1 | Down | -0.8493953465 |
| PubMed_21979375_A2 | Down | -0.3914798626 |
| GSE35957 | Up | 0.4603128742 |
| GSE36640 | Down | -0.3227447178 |
| GSE54402 | Down | -0.1336895369 |
| GSE9593 | Up | 0.0177913712 |
| GSE43922 | Down | -0.7435976188 |
| GSE24585 | Up | 0.2083064385 |
| GSE37065 | Down | -0.0736204040 |
| GSE28863_A1 | Up | 0.3012560990 |
| GSE28863_A2 | Up | 0.2080454611 |
| GSE28863_A3 | Down | -0.3835091622 |
| GSE28863_A4 | Up | 0.0056280873 |
| GSE48662 | Down | -0.3621080964 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018858 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
