HCSGD entry for RNF170
1. General information
| Official gene symbol | RNF170 |
|---|---|
| Entrez ID | 81790 |
| Gene full name | ring finger protein 170 |
| Other gene symbols | SNAX1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016567 | Protein ubiquitination | IEA | biological_process |
| GO:0016874 | Ligase activity | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1956463014 | 0.8744990236 | 0.8572675712 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0197593200 |
| GSE13712_SHEAR | Up | 0.2390620039 |
| GSE13712_STATIC | Up | 0.2100030940 |
| GSE19018 | Up | 0.1955676414 |
| GSE19899_A1 | Up | 0.0136129720 |
| GSE19899_A2 | Up | 0.1922031405 |
| PubMed_21979375_A1 | Up | 0.2027091643 |
| PubMed_21979375_A2 | Up | 0.1784595506 |
| GSE35957 | Up | 0.0940242390 |
| GSE36640 | Up | 1.1580649886 |
| GSE54402 | Down | -0.2674647720 |
| GSE9593 | Up | 0.2573769629 |
| GSE43922 | Up | 0.0620396038 |
| GSE24585 | Up | 0.1169346811 |
| GSE37065 | Up | 0.0533084731 |
| GSE28863_A1 | Down | -0.0242793216 |
| GSE28863_A2 | Up | 0.1118415805 |
| GSE28863_A3 | Down | -0.6937666107 |
| GSE28863_A4 | Up | 0.1247480145 |
| GSE48662 | Down | -0.1845174662 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-142-3p | MIMAT0000434 | MIRT021592 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023233 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040795 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
