HCSGD entry for URM1
1. General information
| Official gene symbol | URM1 |
|---|---|
| Entrez ID | 81605 |
| Gene full name | ubiquitin related modifier 1 |
| Other gene symbols | C9orf74 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002098 | TRNA wobble uridine modification | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | IC | cellular_component |
| GO:0016783 | Sulfurtransferase activity | IDA | molecular_function |
| GO:0032447 | Protein urmylation | IEA | biological_process |
| GO:0034227 | TRNA thio-modification | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9446614148 | 0.1325685726 | 0.9999902473 | 0.7012379421 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1961079509 |
| GSE13712_SHEAR | Down | -0.4986246175 |
| GSE13712_STATIC | Down | -0.2554269367 |
| GSE19018 | Up | 0.0443820097 |
| GSE19899_A1 | Down | -0.0986642781 |
| GSE19899_A2 | Up | 0.1707704877 |
| PubMed_21979375_A1 | Down | -0.2470980174 |
| PubMed_21979375_A2 | Up | 0.3069880949 |
| GSE35957 | Down | -0.0392686032 |
| GSE36640 | Down | -0.0495700296 |
| GSE54402 | Down | -0.1624690384 |
| GSE9593 | Down | -0.0370832725 |
| GSE43922 | Up | 0.0428617726 |
| GSE24585 | Down | -0.4295382298 |
| GSE37065 | Down | -0.2144948071 |
| GSE28863_A1 | Up | 0.1775153492 |
| GSE28863_A2 | Down | -0.2859277658 |
| GSE28863_A3 | Down | -0.1091265419 |
| GSE28863_A4 | Up | 0.0524255094 |
| GSE48662 | Down | -0.0794791750 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028530 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030374 | Microarray | Functional MTI (Weak) | 19748357 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
