HCSGD entry for APOLD1
1. General information
| Official gene symbol | APOLD1 |
|---|---|
| Entrez ID | 81575 |
| Gene full name | apolipoprotein L domain containing 1 |
| Other gene symbols | VERGE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001525 | Angiogenesis | IEA | biological_process |
| GO:0001666 | Response to hypoxia | IEA | biological_process |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006869 | Lipid transport | IEA | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0042118 | Endothelial cell activation | IEA | biological_process |
| GO:0042157 | Lipoprotein metabolic process | IEA | biological_process |
| GO:0045601 | Regulation of endothelial cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1937555146 | 0.0331880856 | 0.8533062741 | 0.3440502560 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5763916135 |
| GSE13712_SHEAR | Up | 0.1070475390 |
| GSE13712_STATIC | Up | 0.2031885895 |
| GSE19018 | Up | 0.0575970032 |
| GSE19899_A1 | Down | -0.1623321670 |
| GSE19899_A2 | Down | -0.8693360438 |
| PubMed_21979375_A1 | Down | -0.3398720636 |
| PubMed_21979375_A2 | Down | -1.2236047070 |
| GSE35957 | Down | -0.6666451790 |
| GSE36640 | Down | -1.5390245005 |
| GSE54402 | Down | -0.3429422293 |
| GSE9593 | Down | -0.9261123876 |
| GSE43922 | Up | 0.0391684854 |
| GSE24585 | Up | 1.6682670563 |
| GSE37065 | Down | -0.2702432272 |
| GSE28863_A1 | Up | 0.0497051905 |
| GSE28863_A2 | Up | 0.7237907774 |
| GSE28863_A3 | Down | -0.3585522965 |
| GSE28863_A4 | Up | 0.1385827884 |
| GSE48662 | Down | -0.2238102848 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016472 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024460 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026548 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030891 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040577 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042977 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049116 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
