HCSGD entry for ANKRD13C
1. General information
| Official gene symbol | ANKRD13C |
|---|---|
| Entrez ID | 81573 |
| Gene full name | ankyrin repeat domain 13C |
| Other gene symbols | RP4-677H15.5 dJ677H15.3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005102 | Receptor binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006621 | Protein retention in ER lumen | IMP | biological_process |
| GO:0010869 | Regulation of receptor biosynthetic process | IDA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
| GO:2000209 | Regulation of anoikis | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2042740587 | 0.3476516660 | 0.8717084144 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1905527323 |
| GSE13712_SHEAR | Down | -0.0190713549 |
| GSE13712_STATIC | Up | 0.4077155941 |
| GSE19018 | Down | -0.5250190564 |
| GSE19899_A1 | Up | 0.1074612697 |
| GSE19899_A2 | Up | 0.2243694529 |
| PubMed_21979375_A1 | Up | 0.9621688128 |
| PubMed_21979375_A2 | Up | 0.5428198647 |
| GSE35957 | Up | 0.3022717055 |
| GSE36640 | Up | 0.2855340480 |
| GSE54402 | Up | 0.2017748918 |
| GSE9593 | Down | -0.0888398806 |
| GSE43922 | Down | -0.0282412833 |
| GSE24585 | Up | 0.2138925981 |
| GSE37065 | Up | 0.0405087581 |
| GSE28863_A1 | Up | 0.0988617404 |
| GSE28863_A2 | Up | 0.4721347366 |
| GSE28863_A3 | Down | -0.8162802629 |
| GSE28863_A4 | Down | -0.4324439943 |
| GSE48662 | Down | -0.2396610546 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020404 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023319 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025095 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
