HCSGD entry for TRIM11
1. General information
| Official gene symbol | TRIM11 |
|---|---|
| Entrez ID | 81559 |
| Gene full name | tripartite motif containing 11 |
| Other gene symbols | BIA1 RNF92 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008134 | Transcription factor binding | IEA | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0019904 | Protein domain specific binding | IEA | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0050768 | Negative regulation of neurogenesis | IEA | biological_process |
| GO:0051607 | Defense response to virus | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3277619923 | 0.9352866039 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1318644449 |
| GSE13712_SHEAR | Up | 0.0941861259 |
| GSE13712_STATIC | Down | -0.0153632852 |
| GSE19018 | Up | 0.0222375499 |
| GSE19899_A1 | Up | 0.0721659310 |
| GSE19899_A2 | Up | 0.3973291334 |
| PubMed_21979375_A1 | Up | 0.1763040084 |
| PubMed_21979375_A2 | Up | 0.3865682304 |
| GSE35957 | Down | -0.1462200363 |
| GSE36640 | Down | -0.0504940719 |
| GSE54402 | Up | 0.3049713065 |
| GSE9593 | Up | 0.0082594118 |
| GSE43922 | Up | 0.2176988811 |
| GSE24585 | Down | -0.0668059454 |
| GSE37065 | Down | -0.1067083444 |
| GSE28863_A1 | Down | -0.0176461372 |
| GSE28863_A2 | Up | 0.2960430646 |
| GSE28863_A3 | Up | 0.0884038929 |
| GSE28863_A4 | Down | -0.1045672167 |
| GSE48662 | Down | -0.0849512049 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-17-5p | MIMAT0000070 | MIRT050803 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
