HCSGD entry for YIPF5
1. General information
| Official gene symbol | YIPF5 |
|---|---|
| Entrez ID | 81555 |
| Gene full name | Yip1 domain family, member 5 |
| Other gene symbols | FinGER5 SB140 SMAP-5 SMAP5 YIP1A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0030134 | ER to Golgi transport vesicle | IEA | cellular_component |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0042175 | Nuclear outer membrane-endoplasmic reticulum membrane network | IEA | cellular_component |
| GO:0060628 | Regulation of ER to Golgi vesicle-mediated transport | IEA | biological_process |
| GO:0070971 | Endoplasmic reticulum exit site | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4864061776 | 0.5263893545 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1507921853 |
| GSE13712_SHEAR | Up | 0.2165630506 |
| GSE13712_STATIC | Up | 0.1606771112 |
| GSE19018 | Down | -0.4826776838 |
| GSE19899_A1 | Up | 0.0337907766 |
| GSE19899_A2 | Up | 0.0993199327 |
| PubMed_21979375_A1 | Down | -0.0036845758 |
| PubMed_21979375_A2 | Down | -0.3428826667 |
| GSE35957 | Up | 0.0844753564 |
| GSE36640 | Up | 0.7802394371 |
| GSE54402 | Down | -0.0409159836 |
| GSE9593 | Up | 0.3231346577 |
| GSE43922 | Up | 0.1056209179 |
| GSE24585 | Up | 0.0957660366 |
| GSE37065 | Down | -0.0085899969 |
| GSE28863_A1 | Down | -0.0983909111 |
| GSE28863_A2 | Up | 0.1049600300 |
| GSE28863_A3 | Down | -0.5229152340 |
| GSE28863_A4 | Down | -0.3056042248 |
| GSE48662 | Up | 0.0420292295 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT021996 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029167 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041446 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042459 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045656 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049586 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
