HCSGD entry for ITFG1
1. General information
| Official gene symbol | ITFG1 |
|---|---|
| Entrez ID | 81533 |
| Gene full name | integrin alpha FG-GAP repeat containing 1 |
| Other gene symbols | TIP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6834629915 | 0.0433988184 | 0.9999902473 | 0.3924082102 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0402857361 |
| GSE13712_SHEAR | Down | -0.2315055919 |
| GSE13712_STATIC | Down | -0.0456132857 |
| GSE19018 | Up | 0.2291315399 |
| GSE19899_A1 | Down | -0.8424056370 |
| GSE19899_A2 | Down | -0.9218281809 |
| PubMed_21979375_A1 | Down | -1.2181572160 |
| PubMed_21979375_A2 | Down | -1.2069595356 |
| GSE35957 | Up | 0.1353227354 |
| GSE36640 | Up | 0.8219599590 |
| GSE54402 | Down | -0.7432776380 |
| GSE9593 | Up | 0.4143727622 |
| GSE43922 | Down | -0.5071279938 |
| GSE24585 | Up | 0.0710884779 |
| GSE37065 | Up | 0.1206796334 |
| GSE28863_A1 | Up | 0.0901762073 |
| GSE28863_A2 | Up | 0.3841745824 |
| GSE28863_A3 | Down | -0.6060321731 |
| GSE28863_A4 | Up | 0.1814049903 |
| GSE48662 | Up | 0.0766370005 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028851 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046353 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
