HCSGD entry for DPF3
1. General information
| Official gene symbol | DPF3 |
|---|---|
| Entrez ID | 8110 |
| Gene full name | D4, zinc and double PHD fingers, family 3 |
| Other gene symbols | CERD4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0008270 | Zinc ion binding | NAS | molecular_function |
| GO:0016568 | Chromatin modification | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0071565 | NBAF complex | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6676175411 | 0.0748833935 | 0.9999902473 | 0.5161162565 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1003960309 |
| GSE13712_SHEAR | Up | 0.4419847493 |
| GSE13712_STATIC | Up | 0.3165810294 |
| GSE19018 | Down | -0.2523517109 |
| GSE19899_A1 | Down | -0.0586071804 |
| GSE19899_A2 | Up | 0.0816524474 |
| PubMed_21979375_A1 | Down | -1.2429953267 |
| PubMed_21979375_A2 | Down | -0.3969613927 |
| GSE35957 | Up | 0.3759525492 |
| GSE36640 | Down | -1.8454601607 |
| GSE54402 | Down | -1.3099616597 |
| GSE9593 | Up | 0.0624296278 |
| GSE43922 | Down | -0.7843820608 |
| GSE24585 | Up | 0.1666125442 |
| GSE37065 | Down | -0.0054119437 |
| GSE28863_A1 | Down | -0.0755577711 |
| GSE28863_A2 | Down | -0.0421026457 |
| GSE28863_A3 | Up | 0.2946369269 |
| GSE28863_A4 | Up | 0.0674691143 |
| GSE48662 | Up | 0.0561214492 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030041 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
